Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGAGTGGATTCCAGGTGGT&ACTATCAGGGAATCTGGAGTCCTC
((((...((((((((.((((((&))))))..))))))))...)))).
Details
MiRNAhsa-miR-5192
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1262,1286
Score0.923
Seed0
Au0.618
Energy-20.4
Binding len24
Me-11.734
Phylopstem2.041677
Phylopflank4.375452288750001
Longest consecutive pairings8
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure