Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGGGTTTGGAATGGGATGG&TATGCATTTCCAAGCCTTTTG
.(((((((((((((..(.(((.&))).)..))))))))))))).
Details
MiRNAhsa-miR-5194
RefseqIDNM_004362
GeneSymbolCLGN
Binding site120,141
Score1.0
Seed1
Au0.603
Energy-20.5
Binding len21
Me-4.762
Phylopstem1.5581848538461536
Phylopflank0.96368285375
Longest consecutive pairings13
Position of longest consecutive pairings1
Pairings in 3prime end4
Position5UTR
2D Structure