Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGGGTTTGGAATGGGATGG&CCTCCTATCAAACCTCCCAA
((.((((((((..((((((.((&)))))))))))))))).)).
Details
MiRNAhsa-miR-5194
RefseqIDNM_004362
GeneSymbolCLGN
Binding site895,915
Score0.923
Seed0
Au0.588
Energy-19.2
Binding len20
Me-10.131
Phylopstem4.848743499999999
Phylopflank4.6617616675
Longest consecutive pairings16
Position of longest consecutive pairings4
Pairings in 3prime end7
PositionCDS
2D Structure