Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGGGTTTGGAATGGGATGG&TCATCCATTTCTTCTGACTTCTTT
.((((((((.((((..((((((&))))))..))))...)))))))).
Details
MiRNAhsa-miR-5194
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1320,1344
Score1.0
Seed1
Au0.632
Energy-18.5
Binding len24
Me-6.004
Phylopstem2.51530925
Phylopflank3.6385620550000004
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure