Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATCCAGTTCTCTGAGGGGGCT&GGCACCTCAGATTCTTAATCCAGCATGTCGGATTGGGTG
((((((((((((((((..(((&))).)))))))..................))))))))).
Details
MiRNAhsa-miR-5195-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1146,1185
Score0.885
Seed1
Au0.515
Energy-21.5
Binding len39
Me-3.938
Phylopstem2.9279466470588233
Phylopflank4.2249748587500005
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure