Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGGAAGGGGACGAGGGTTGGG&CCTAACTATCAGGGAATCTGGAGTCCTCGAAAAATTCCTA
.(((((((((((((.(((((((&))))))).))............))))))......))))).
Details
MiRNAhsa-miR-5196-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1258,1298
Score0.808
Seed1
Au0.618
Energy-18.7
Binding len40
Me-4.529
Phylopstem3.6795428387096782
Phylopflank4.18913725875
Longest consecutive pairings7
Position of longest consecutive pairings33
Pairings in 3prime end7
PositionCDS
2D Structure