Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCATCCTCGTCTCCCTCCCAG&CTGGGTCAGAGGATGAGATGAA
((((.((((((((...(((((&)))))...))).))))))))).
Details
MiRNAhsa-miR-5196-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1856,1878
Score0.923
Seed0
Au0.574
Energy-20.2
Binding len22
Me-9.882
Phylopstem3.6181488444444443
Phylopflank3.86096480625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure