Details of Duplex


2D Structure dot-bracket from RNAduplex"
GTCCTAGGAGGCTCCTCTG&TAGTTGATCAAACAGTTGTAAACAAAGGAAGCCTCCTAGAGGATG
((((((((((((((((.((&.)).)))).)))))))..))))).
Details
MiRNAhsa-miR-5571-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site845,890
Score0.808
Seed1
Au0.574
Energy-24.9
Binding len24
Me-3.938
Phylopstem4.394311721052632
Phylopflank4.52750199875
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure