Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCAGATCCCAGCGGTGCCTCT&GAGAGCACAGGATCTGGAG
(((((((((.....(((((((.&))).)))).))))))))).
Details
MiRNAhsa-miR-5100
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1888,1907
Score1.0
Seed1
Au0.544
Energy-20.9
Binding len19
Me-13.498
Phylopstem2.0630828888888884
Phylopflank4.70623164625
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure