Details of Duplex


2D Structure dot-bracket from RNAduplex"
TATCCAGCTTGTTACTATATGC&GTATATTTTGCAGAAACTTTTGATAGTGGAAGGTTGGCTGGATGG
(((((((((..(((((((....&.)))))))......))))))))).
Details
MiRNAhsa-miR-5586-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site298,343
Score0.846
Seed1
Au0.618
Energy-17.8
Binding len24
Me-8.005
Phylopstem1.2018767777777777
Phylopflank2.6149442024999994
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure