Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCCCCGGGCAGTGTGATCATC&ATGGCAGCTGCTGAAGGGCA
((((..((((((((.((....&)).))).)))))...)))).
Details
MiRNAhsa-miR-5587-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1507,1527
Score0.846
Seed0
Au0.574
Energy-19.1
Binding len20
Me-10.693
Phylopstem3.8163105555555554
Phylopflank2.8889334850000004
Longest consecutive pairings5
Position of longest consecutive pairings8
Pairings in 3prime end3
PositionCDS
2D Structure