Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATAGGCCACGGATCTGGGCAA&TGCTCTTGGTTTAGAGCTTTGGTCTATG
.((((((((.((.(((((((..&.))))))).)).)))))))).
Details
MiRNAhsa-miR-1295b-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1347,1375
Score0.878
Seed1
Au0.662
Energy-19.8
Binding len21
Me-6.325
Phylopstem4.719543249999999
Phylopflank3.2442940675
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure