Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGTCCCACTAATGCCAGC&GTTGGCTGGATGGGTCTTA
(((.(((((((..((((((&))))))))).)))).))).
Details
MiRNAhsa-miR-5588-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site330,349
Score0.923
Seed0
Au0.603
Energy-18.5
Binding len19
Me-11.606
Phylopstem4.069873249999999
Phylopflank2.16871255
Longest consecutive pairings9
Position of longest consecutive pairings10
Pairings in 3prime end6
PositionCDS
2D Structure