Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGCCATACATAGACTTTATT&AATAAAGTTTCTGTATGGTT
..((((((((.((((((((((&)))))))))).)))))))).
Details
MiRNAhsa-miR-5590-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2384,2404
Score0.846
Seed1
Au0.691
Energy-19.4
Binding len20
Me-7.782
Phylopstem4.0847194
Phylopflank3.4415022112499996
Longest consecutive pairings10
Position of longest consecutive pairings10
Pairings in 3prime end8
Position3UTR
2D Structure