Details of Duplex


2D Structure dot-bracket from RNAduplex"
AATAAAGTTCATGTATGGCAA&TGCCAGACCTGAACTTTAA
..(((((((((.((.(((((.&))))).)).))))))))).
Details
MiRNAhsa-miR-5590-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2012,2031
Score0.846
Seed1
Au0.618
Energy-19.3
Binding len19
Me-9.039
Phylopstem2.3672135555555553
Phylopflank3.0197938925
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure