Details of Duplex


2D Structure dot-bracket from RNAduplex"
GAGAAATGCTGGACTAATCTGC&CAGACATTTATTTTAGTCCTTCATTTCA
..((((((..(((((((((((.&))))........)))))))..)))))).
Details
MiRNAhsa-miR-5680
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2078,2106
Score0.846
Seed1
Au0.706
Energy-18.0
Binding len28
Me-7.256
Phylopstem3.8439362947368427
Phylopflank3.2755060225000006
Longest consecutive pairings7
Position of longest consecutive pairings9
Pairings in 3prime end7
Position3UTR
2D Structure