Details of Duplex


2D Structure dot-bracket from RNAduplex"
TACAGATGCAGATTCTCTGACTTC&TCAGGGAATCTGGAGTCC
....(((.((((((((((((....&))))))))))))..))).
Details
MiRNAhsa-miR-5683
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1266,1284
Score0.923
Seed0
Au0.603
Energy-20.0
Binding len18
Me-11.86
Phylopstem2.6211613333333332
Phylopflank4.568613588750001
Longest consecutive pairings12
Position of longest consecutive pairings6
Pairings in 3prime end4
PositionCDS
2D Structure