Details of Duplex


2D Structure dot-bracket from RNAduplex"
AACTCTAGCCTGAGCAACAG&CTGGGCTGCAGATGGTTGGAGA
..(((((((((((((..(((&))).))).))...)))))))).
Details
MiRNAhsa-miR-5684
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1434,1456
Score0.846
Seed1
Au0.603
Energy-16.6
Binding len22
Me-5.19
Phylopstem5.021165117647059
Phylopflank2.6935227950000007
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure