Details of Duplex


2D Structure dot-bracket from RNAduplex"
ACAGCCCAGCAGTTATCACGGG&CCTGGTGTATTAAAACAGTTAATGGCAGCTGCTGAAGGGCA
...(((((((((((.(((((((&))))..................))).)))))))...)))).
Details
MiRNAhsa-miR-5685
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1486,1527
Score0.846
Seed0
Au0.574
Energy-19.0
Binding len41
Me-7.25
Phylopstem4.210359071428572
Phylopflank3.257785035
Longest consecutive pairings7
Position of longest consecutive pairings8
Pairings in 3prime end7
PositionCDS
2D Structure