Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCATACACCTGTAGTCCTAGA&TCTGTTCGGAAAAGGAAGTAGCAGATCACTGGGCTGCAGATGGTTGG
..((..((.((((((.(((((.&.))))))))))).))..)).
Details
MiRNAhsa-miR-5689
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1406,1453
Score1.0
Seed0
Au0.588
Energy-20.3
Binding len20
Me-12.266
Phylopstem3.031193
Phylopflank3.464223275
Longest consecutive pairings11
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure