Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGCTACTACCTCTATTAGG&CCTCCTAGAGGATGTGGTTC
..((((((..((((((..(((&)))..))))))..)))))).
Details
MiRNAhsa-miR-5690
RefseqIDNM_004362
GeneSymbolCLGN
Binding site876,896
Score0.846
Seed1
Au0.574
Energy-17.3
Binding len20
Me-7.256
Phylopstem3.3394355
Phylopflank4.4989152274999995
Longest consecutive pairings6
Position of longest consecutive pairings9
Pairings in 3prime end6
PositionCDS
2D Structure