Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCAGCTACTACCTCTATTAGG&GAGGTGTTAGTTGAT
(((((((.((((((.......&)))))).))))))).
Details
MiRNAhsa-miR-5690
RefseqIDNM_004362
GeneSymbolCLGN
Binding site838,853
Score0.877
Seed1
Au0.603
Energy-17.3
Binding len15
Me-7.22
Phylopstem3.6048075714285717
Phylopflank4.4322587024999995
Longest consecutive pairings7
Position of longest consecutive pairings1
Pairings in 3prime end1
PositionCDS
2D Structure