Details of Duplex


2D Structure dot-bracket from RNAduplex"
GCAGTGGCTCTGAAATGAACTC&TTCATTTCAGAGG
.......((((((((((((...&)))))))))))).
Details
MiRNAhsa-miR-5693
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2097,2110
Score1.0
Seed0
Au0.691
Energy-16.7
Binding len13
Me-17.11
Phylopstem2.660386583333333
Phylopflank3.755983767499999
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end5
Position3UTR
2D Structure