Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGATCATGGGACTGTCTCAG&GAGATAGTTTTGGTTTGT
(((((((..((((((((((..&))))))))))))))))).
Details
MiRNAhsa-miR-5694
RefseqIDNM_004362
GeneSymbolCLGN
Binding site2224,2242
Score0.923
Seed1
Au0.691
Energy-18.8
Binding len18
Me-7.308
Phylopstem4.0344565
Phylopflank3.7439638562499997
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end6
Position3UTR
2D Structure