Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGATCATGGGACTGTCTCAG&CTGAAGGGCACCCATGGCTTTGG
(((((((((((..((((((((&))))..))))))))))).)))).
Details
MiRNAhsa-miR-5694
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1517,1540
Score0.846
Seed1
Au0.485
Energy-18.3
Binding len23
Me-8.574
Phylopstem3.448069
Phylopflank3.6918949524999998
Longest consecutive pairings11
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure