Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGGGAGTGCAGTGATTGTGG&ATAATCAATATGCATTTCCA
...(((((((((.(((((((..&)))))))...))))))))).
Details
MiRNAhsa-miR-5698
RefseqIDNM_004362
GeneSymbolCLGN
Binding site112,132
Score0.923
Seed0
Au0.588
Energy-18.4
Binding len20
Me-7.804
Phylopstem0.8009195666666667
Phylopflank0.9601983599999999
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure