Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGGAGAAGTCGGGAAGGT&TCTTCTGACTTCTTTC
.(((((((((.((((((.&))))))))))))))).
Details
MiRNAhsa-miR-5703
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1329,1345
Score0.846
Seed1
Au0.632
Energy-16.7
Binding len16
Me-6.618
Phylopstem2.2599722222222223
Phylopflank3.6432519225
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure