Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGTTTCGGGGCTCATGGCCTGTG&CACTGGTCGATAATCCTAACTATCAGGGAATCTGGAGTCCTCGAAAA
..(((((((((((..((((((..&.))))...))..)))))).))))).
Details
MiRNAhsa-miR-5705
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1244,1291
Score0.846
Seed1
Au0.632
Energy-20.6
Binding len25
Me-6.549
Phylopstem3.761733833333334
Phylopflank4.43611872625
Longest consecutive pairings6
Position of longest consecutive pairings7
Pairings in 3prime end6
PositionCDS
2D Structure