Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGCTGGGGCGCGGGGAGGT&GCTGCTGCGCGGCCGCCGGCG
..(((((((((((.((.(((&))).)).)))).)).))))).
Details
MiRNAhsa-miR-5787
RefseqIDNM_004362
GeneSymbolCLGN
Binding site7,28
Score0.846
Seed1
Au0.298
Energy-24.9
Binding len21
Me-5.814
Phylopstem0.4968776076923077
Phylopflank0.17555892750000002
Longest consecutive pairings5
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure