Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTGCGAGTCTCCGGCGGTGG&CGGCCGCCGGCGGGACTGGTCTGAAGAGACGCGGGG
(((((((((((((((((((.(&).))))))))..)))))............)))))).
Details
MiRNAhsa-miR-6068
RefseqIDNM_004362
GeneSymbolCLGN
Binding site16,52
Score1.0
Seed1
Au0.324
Energy-31.7
Binding len36
Me-3.938
Phylopstem0.4054344333333334
Phylopflank0.2945793950000001
Longest consecutive pairings8
Position of longest consecutive pairings26
Pairings in 3prime end7
Position5UTR
2D Structure