Details of Duplex


2D Structure dot-bracket from RNAduplex"
TCCTCATCACACTGCACCTTAG&TTGAGGTGTTAGTTGATCAAACAGTTGTAAACAAAGGAAGCCTCCTAGAGGAT
(((((((((.((((((((((((&))))))))).)))))))..............................))))).
Details
MiRNAhsa-miR-6072
RefseqIDNM_004362
GeneSymbolCLGN
Binding site836,889
Score0.846
Seed1
Au0.559
Energy-18.4
Binding len53
Me-5.18
Phylopstem4.05146123076923
Phylopflank4.28227497375
Longest consecutive pairings9
Position of longest consecutive pairings44
Pairings in 3prime end8
PositionCDS
2D Structure