Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGGGCTGGGGGAGCACA&TGCATTTCCAAGCCTTTTG
((((((((.((((((((..&))).))))).)))))))).
Details
MiRNAhsa-miR-6085
RefseqIDNM_004362
GeneSymbolCLGN
Binding site122,141
Score0.923
Seed1
Au0.603
Energy-18.2
Binding len19
Me-4.994
Phylopstem0.8009195666666667
Phylopflank0.9601983599999999
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure