Details of Duplex


2D Structure dot-bracket from RNAduplex"
AAGGGGCTGGGGGAGCACA&GTGCTCTTGGTTTAGAGCTTTGGTCTATGACCTCTG
.(((((((((((((((((.&)))))))................)))).).))))).
Details
MiRNAhsa-miR-6085
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1346,1382
Score0.846
Seed1
Au0.662
Energy-17.6
Binding len36
Me-3.793
Phylopstem3.0830046628571424
Phylopflank3.4624126725000006
Longest consecutive pairings7
Position of longest consecutive pairings29
Pairings in 3prime end7
PositionCDS
2D Structure