Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGAGATGAAGCGGGGGGGCG&GGTCTTCTGTTCATCTCA
.((((((.(((((((((.(.&).))))))))))))))).
Details
MiRNAhsa-miR-6088
RefseqIDNM_004362
GeneSymbolCLGN
Binding site151,169
Score1.0
Seed1
Au0.632
Energy-21.4
Binding len18
Me-6.107
Phylopstem1.6294041111111108
Phylopflank1.08705868875
Longest consecutive pairings15
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure