Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGGAGCGAGGGGCGGGGC&GCCTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCA
.(((((.((((((((((((&)))))............))))))).........))))).
Details
MiRNAhsa-miR-6090
RefseqIDNM_004362
GeneSymbolCLGN
Binding site875,914
Score0.923
Seed0
Au0.588
Energy-20.4
Binding len39
Me-5.337
Phylopstem4.867075791666666
Phylopflank4.86209929375
Longest consecutive pairings7
Position of longest consecutive pairings15
Pairings in 3prime end8
PositionCDS
2D Structure