Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGGAGTGGATTGTATG&ATCCATTTCTTCT
.((((((((((((......&)))))))))))).
Details
MiRNAhsa-miR-6130
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1322,1335
Score0.846
Seed1
Au0.632
Energy-15.5
Binding len13
Me-5.619
Phylopstem4.386042166666667
Phylopflank3.4313009974999997
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end2
PositionCDS
2D Structure