Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGAGGGAGGAGGTTGGGTA&CCTGATCCTTCTGCCGTCAA
(((.(((((((((((((..&))))).)))))).)).))).
Details
MiRNAhsa-miR-6133
RefseqIDNM_004362
GeneSymbolCLGN
Binding site973,993
Score0.923
Seed0
Au0.544
Energy-19.7
Binding len20
Me-6.97
Phylopstem4.336095333333333
Phylopflank5.047109881250002
Longest consecutive pairings6
Position of longest consecutive pairings8
Pairings in 3prime end6
PositionCDS
2D Structure