Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGCAGGAGGTGAGGGGAG&TTCCTGATCCTTCTGCC
..((((((((...(((((.&)))))...)))))))).
Details
MiRNAhsa-miR-6165
RefseqIDNM_004362
GeneSymbolCLGN
Binding site971,988
Score1.0
Seed1
Au0.559
Energy-20.1
Binding len17
Me-12.418
Phylopstem4.004421625
Phylopflank4.95069926875
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end5
PositionCDS
2D Structure