Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCAGTGTTTGTTTTGCCCACA&TGTGGAGGTGCATACATTAAACTCCTAGCAGACACTGA
..(((((((((((.((((((((&)))))....)))..............))))))))))).
Details
MiRNAhsa-miR-6499-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site571,609
Score0.923
Seed1
Au0.647
Energy-18.8
Binding len38
Me-5.814
Phylopstem6.82916909090909
Phylopflank5.58046113375
Longest consecutive pairings11
Position of longest consecutive pairings1
Pairings in 3prime end8
PositionCDS
2D Structure