Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGCAGTGTTTGTTTTGCCCACA&TGGGATGAAAGTGAACCTGCC
.((((.((((.(((((((((..&)))).)))))..)))))))).
Details
MiRNAhsa-miR-6499-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1003,1024
Score0.904
Seed0
Au0.559
Energy-16.0
Binding len21
Me-8.519
Phylopstem5.582729800000001
Phylopflank5.073923056250001
Longest consecutive pairings8
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure