Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTTGCCAGGGCTGCCTTTGGT&GCTGAAGGGCACCCATGGCT
....(((((((.((((((((((&))).)))))))))).)))).
Details
MiRNAhsa-miR-6501-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1516,1536
Score0.923
Seed0
Au0.529
Energy-22.9
Binding len20
Me-12.893
Phylopstem3.207419272727273
Phylopflank3.165064735
Longest consecutive pairings10
Position of longest consecutive pairings6
Pairings in 3prime end8
PositionCDS
2D Structure