Details of Duplex


2D Structure dot-bracket from RNAduplex"
GGGACTAGGATGCAGACCTCC&GAGGTGTTAGTTGATCAAACAGTTGTAAACAAAGGAAGCCTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCA
((((((((((.(((.(((((.&))))).)..............................)).)))))).........................)))).
Details
MiRNAhsa-miR-6503-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site838,914
Score0.897
Seed1
Au0.588
Energy-18.5
Binding len76
Me-7.498
Phylopstem4.564340848571428
Phylopflank4.903432722500001
Longest consecutive pairings6
Position of longest consecutive pairings30
Pairings in 3prime end6
PositionCDS
2D Structure