Details of Duplex


2D Structure dot-bracket from RNAduplex"
CATTACAGCACAGCCATTCT&GGAAGGTTGGCTGGATGG
((((.((((.(((((.((((&))))))))))))))))).
Details
MiRNAhsa-miR-6504-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site325,343
Score1.0
Seed0
Au0.618
Energy-18.2
Binding len18
Me-9.532
Phylopstem2.1566886
Phylopflank2.290290739999999
Longest consecutive pairings17
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure