Details of Duplex


2D Structure dot-bracket from RNAduplex"
TGGGCCATGCATTTCTAGAACT&GGATCTGGAGATGGGCCG
..((((...((((((((((.((&)).)))))))))))))).
Details
MiRNAhsa-miR-6508-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1897,1915
Score1.0
Seed0
Au0.529
Energy-19.8
Binding len18
Me-9.871
Phylopstem1.5473186
Phylopflank4.5201887
Longest consecutive pairings14
Position of longest consecutive pairings1
Pairings in 3prime end7
PositionCDS
2D Structure