Details of Duplex


2D Structure dot-bracket from RNAduplex"
ATTAGGTAGTGGCAGTGGAAC&GGACCAAGTGGCAACGACTTGGACATCTGAGCTGTCACTGCCG
....(((((((((((((((..&.)))..)))))))))))).
Details
MiRNAhsa-miR-6509-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site50,93
Score1.0
Seed0
Au0.515
Energy-22.2
Binding len19
Me-9.547
Phylopstem0.5106657058823529
Phylopflank0.30981382874999996
Longest consecutive pairings12
Position of longest consecutive pairings1
Pairings in 3prime end6
Position5UTR
2D Structure