Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTCCACTGCCACTACCTAATTT&GGATTGGGTGTGGTGAGTGGAAA
((((((((((((.(((((((((&)))))))))))))).))))))).
Details
MiRNAhsa-miR-6509-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1175,1198
Score0.923
Seed1
Au0.559
Energy-26.7
Binding len23
Me-5.227
Phylopstem3.519043846153846
Phylopflank3.7980660274999996
Longest consecutive pairings14
Position of longest consecutive pairings9
Pairings in 3prime end8
PositionCDS
2D Structure