Details of Duplex


2D Structure dot-bracket from RNAduplex"
TTGGGATGGTAGGACCAGAGGGG&CTCCTAGAGGATGTGGTTCCTCCTATCAAACCTCCCAAA
((((((((((((((((..(((((&)))))...))..........))))))))....)))))).
Details
MiRNAhsa-miR-6728-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site877,916
Score0.846
Seed1
Au0.588
Energy-21.8
Binding len39
Me-3.938
Phylopstem4.849965889999999
Phylopflank4.7976571025000005
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end6
PositionCDS
2D Structure