Details of Duplex


2D Structure dot-bracket from RNAduplex"
CCTGACACCCCATCTGCCCTCA&TGGGCTGCAGATGGTTGGAGATGGA
((.....((((((((((.((((&))))..))))))))..))....)).
Details
MiRNAhsa-miR-6730-3p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site1435,1460
Score0.846
Seed0
Au0.588
Energy-17.8
Binding len25
Me-16.091
Phylopstem5.084309833333333
Phylopflank2.6966494450000003
Longest consecutive pairings8
Position of longest consecutive pairings11
Pairings in 3prime end7
PositionCDS
2D Structure