Details of Duplex


2D Structure dot-bracket from RNAduplex"
CAGGGCAGAGGGCACAGGAATCTGA&TGGGATGAAAGAGCAAAAATTCCTGATCCTTCTGCCG
...(((((((((..(((((((....&.)))))))..))))))))).
Details
MiRNAhsa-miR-6735-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site952,989
Score1.0
Seed0
Au0.574
Energy-27.6
Binding len20
Me-8.661
Phylopstem3.2864323888888887
Phylopflank4.8127916837499995
Longest consecutive pairings9
Position of longest consecutive pairings1
Pairings in 3prime end4
PositionCDS
2D Structure