Details of Duplex


2D Structure dot-bracket from RNAduplex"
AGTTTGGGATGGAGAGAGGAGA&TTTCCAAGCCTTTTGGCTATGTTTGGGTCTTCTGTTCATCTCAAT
...((((((((((.((((((..&.)))))).)))))))))).
Details
MiRNAhsa-miR-6740-5p
RefseqIDNM_004362
GeneSymbolCLGN
Binding site126,171
Score0.897
Seed0
Au0.632
Energy-21.8
Binding len19
Me-7.371
Phylopstem2.2636201
Phylopflank0.9233379062499998
Longest consecutive pairings10
Position of longest consecutive pairings1
Pairings in 3prime end6
PositionCDS
2D Structure